Merging DataFrames with Missing Values Using Python and Pandas

Merging DataFrames with Missing Values

In this article, we will explore the process of adding missing IDs from one DataFrame to another DataFrame with the same rows. We will use Python and its popular data manipulation library, Pandas.

Introduction

DataFrames are a powerful tool for data analysis in Python. They allow us to easily manipulate and transform data while maintaining its structure. However, sometimes we encounter DataFrames with missing values that need to be filled or merged with other DataFrames.

In this article, we will focus on the process of adding missing IDs from one DataFrame to another DataFrame with the same rows. We will use the Pandas library in Python to achieve this task.

Background

Before diving into the solution, let’s understand the basic concepts and data structures used in this article:

  • DataFrames: A 2-dimensional labeled data structure with columns of potentially different types. You can think of a DataFrame as an Excel spreadsheet or a table in a relational database.
  • Series: A 1-dimensional labeled array of values. Series are similar to DataFrames but have only one column.
  • Pandas: The Python library used for data manipulation and analysis.

The Problem

Suppose we have two DataFrames, df and df2, with the same columns. We want to add missing IDs from df to df2. However, some of the values in the ‘id’ column of df2 are missing or empty strings.

Here’s a sample DataFrame for df:

idNameAge
1Joey22
2Anna34
3Jon33
4Amy30
5Kay22

And here’s a sample DataFrame for df2:

idNameAgeSport
3Jon33Tennis
5Kay22Football
1Joey22Basketball
4Amy30Running

We want to add the missing IDs from df to df2, replacing empty strings with the corresponding values.

Solution

One way to solve this problem is by using the .map() and .fillna() functions in Pandas. Here’s a step-by-step solution:

Step 1: Replace Empty Strings with NaN Values

First, we need to replace the empty strings in df2['id'] with NaN values.

# Import necessary libraries
import pandas as pd
import numpy as np

# Create DataFrames for df and df2
df = pd.DataFrame({
    'id': [1, 2, 3, 4, 5],
    'Name': ['Joey', 'Anna', 'Jon', 'Amy', 'Kay'],
    'Age': [22, 34, 33, 30, 22]
})

df2 = pd.DataFrame({
    'id': ['3', '5', '1', np.nan, '4'],
    'Name': ['Jon', 'Kay', 'Joey', 'Amy', 'Anna'],
    'Age': [33, 22, 22, 30, 42],
    'Sport': ['Tennis', 'Football', 'Basketball', None, 'Dancing']
})

# Replace empty strings with NaN values in df2['id']
df2['id'] = df2['id'].replace('', np.nan)

Step 2: Map Missing IDs to Corresponding Values

Next, we need to map the missing IDs from df to their corresponding values.

# Set df as the index for df1
df1 = df.set_index('Name')['id']

# Map NaN values in df2['id'] to corresponding values in df1
df2['id'] = df2['id'].map(df1).fillna(0)

However, this approach might not work perfectly because NaN is not a valid ID value. Instead, we should directly map the missing IDs from df to their corresponding values.

# Map missing IDs in df2['id'] to corresponding values in df
df2['id'] = df2['id'].map(df1).fillna(0)

Step 3: Convert ID Values to Integers

Finally, we need to convert the id values from strings to integers.

# Convert id values to integers
df2['id'] = df2['id'].astype(int)

Complete Code

Here’s the complete code that solves this problem:

import pandas as pd
import numpy as np

# Create DataFrames for df and df2
df = pd.DataFrame({
    'id': [1, 2, 3, 4, 5],
    'Name': ['Joey', 'Anna', 'Jon', 'Amy', 'Kay'],
    'Age': [22, 34, 33, 30, 22]
})

df2 = pd.DataFrame({
    'id': ['3', '5', '1', np.nan, '4'],
    'Name': ['Jon', 'Kay', 'Joey', 'Amy', 'Anna'],
    'Age': [33, 22, 22, 30, 42],
    'Sport': ['Tennis', 'Football', 'Basketball', None, 'Dancing']
})

# Set df as the index for df1
df1 = df.set_index('Name')['id']

# Map missing IDs in df2['id'] to corresponding values in df1
df2['id'] = df2['id'].map(df1).fillna(0)

# Convert id values to integers
df2['id'] = df2['id'].astype(int)

print(df2)

Conclusion

In this article, we solved the problem of adding missing IDs from one DataFrame to another DataFrame with the same rows. We used Pandas’ .map() and .fillna() functions to achieve this goal.

We also discussed why using NaN values might not be a good approach in certain scenarios.

The complete code provided at the end should help you solve similar problems involving DataFrame manipulation.


Last modified on 2024-08-22